Data quality metrics extracted from 8p5s.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8P5S at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE MASSIF-3
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MASSIF-3
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-08-26
Detector
_diffrn_detector.type
DECTRIS EIGER X 4M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9677
Software
Data reduction
_software.classification
autoPROC
Data scaling
_software.classification
autoPROC
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.10.4)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
150.987 150.987 314.335 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96770 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
100.520
High resolution limit [Å]
_reflns.d_resolution_high
2.460
  Rmerge -
  Rmeas -
Rpim
_reflns.pdbx_Rpim_I_all
0.047
  Total number of observations -
Total number unique
_reflns.number_obs
38261
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
15.50
Completeness [%]
_reflns.percent_possible_obs
94.4
Multiplicity
_reflns.pdbx_redundancy
10.4
CC(1/2)
_reflns.pdbx_CC_half
0.998

Refinement
PDB entry ID
_entry.id
8P5S
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-05-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
27.5 - 2.459 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2038 / 0.2509
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
8P5R