Data quality metrics extracted from 4p5q.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4P5Q at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-02-22
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.99989
Software
Data reduction
_software.classification
XDS (VERSION January 10, 2014 BUILT=20140115)
Data scaling
_software.classification
Aimless (VESION: 0.2.17)
Phasing
_software.classification
PHASER (2.5.6)
Refinement
_software.classification
PHENIX (phenix.refine: 1.8.4_1496)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
53.374 38.196 75.771 90.00 101.61 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.99989 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.480 47.480 1.370
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.350 7.390 1.350
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.049 0.027 0.705
  Rmeas - - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.028 0.018 0.398
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
261570 590 12017
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
64017 205 2998
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
15.90 34.10 2.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.1 45.3 93.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.1 2.9 4.0
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4P5Q
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-03-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.2 - 1.350 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1572 / 0.1819
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2QOB