Data quality metrics extracted from 5otz.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5OTZ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-12-19
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97625
Software
Data reduction
_software.classification
XDS
Data scaling #1
_software.classification
Aimless (0.5.29)
Data scaling #2
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.10.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
58.721 46.224 63.327 90.00 112.58 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97625 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
54.220 54.220 1.500
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.460 6.530 1.460
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.083 0.064 0.902
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.099 0.077 1.100
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.054 0.041 0.621
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
176660 2136 12101
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
54630 658 4026
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
6.70 18.60 1.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.7 99.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.2 3.2 3.0
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.994 0.985 0.507

Refinement
PDB entry ID
_entry.id
5OTZ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-08-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
54.2 - 1.460 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1821 / 0.2108