Data quality metrics extracted from 5otr.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5OTR at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
BRUKER AXS MICROSTAR
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2016-01-23
Detector
_diffrn_detector.type
Bruker Platinum 135
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54
Software
Data reduction #1
_software.classification
XPREP (2013/3)
Data reduction #2
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.10.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
58.890 46.191 62.924 90.00 112.16 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
36.200 36.200 1.540
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.520 6.310 1.520
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.057 0.034 0.450
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
464005 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
48157 723 1703
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
21.38 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.5 99.4 94.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
9.6 20.9 3.1
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5OTR
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-08-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
36.2 - 1.520 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1793 / 0.2024
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5CVH