Data quality metrics extracted from 6osd.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6OSD at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
ENRAF-NONIUS FR591
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2017-10-20
Detector
_diffrn_detector.type
APEX II CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5406
Software
Data reduction
_software.classification
PROTEUM PLUS
Data scaling
_software.classification
PROTEUM PLUS
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (dev_2906)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
38.895 38.895 103.470 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54060 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
17.630
High resolution limit [Å]
_reflns.d_resolution_high
2.150
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.193
Rmeas
_reflns.pdbx_Rrim_I_all
0.205
Rpim
_reflns.pdbx_Rpim_I_all
0.068
  Total number of observations -
Total number unique
_reflns.number_obs
3174
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.40
Completeness [%]
_reflns.percent_possible_obs
99.7
Multiplicity
_reflns.pdbx_redundancy
7.7
CC(1/2)
_reflns.pdbx_CC_half
0.927

Refinement
PDB entry ID
_entry.id
6OSD
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-05-01
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
17.6 - 2.150 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1774 / 0.2459
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given