Data quality metrics extracted from 3op5.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3OP5 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I02
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I02
Temperature [K]
_diffrn.ambient_temp
200
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-06-30
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9795
Software
Data collection
_software.classification
PROTEUM PLUS (PLUS)
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (3.3.16; 2010/01/06; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk)
Refinement #2
_software.classification
BUSTER (2.8.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
92.97 97.19 191.99 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97950 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.338 46.338 2.530
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 7.590 2.400
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.113 0.032 0.548
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
67821 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
7.80 16.60 1.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.9 96.5 98.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.5 3.5 3.4
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3OP5
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-08-31
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.3 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1783 / 0.2133
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
ENSEMBL OF PDB ENTRIES 2V62, 2JII and 1CKJ