Data quality metrics extracted from 3oku.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3OKU at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU RU200
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2010-06-09
Detector
_diffrn_detector.type
RIGAKU RAXIS IV++
Software
Data reduction #1
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data reduction #2
_software.classification
HKL-2000
Data scaling #1
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling #2
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX (1.6.3_467)
Refinement
_software.classification
PHENIX (1.6.3_467; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
42.168 41.199 71.548 90.00 104.12 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 1.500
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.450 1.450
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.055 0.206
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
40524 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
28.40 6.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.3 80.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.7 3.5
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3OKU
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-08-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
23.1 - 1.450 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1410 / 0.1580
Structure solution method
_refine.pdbx_method_to_determine_struct
MIR
Starting model
_refine.pdbx_starting_model
PDB ENTRY 2ILI