Data quality metrics extracted from 8oiz.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8OIZ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-01-27
Detector
_diffrn_detector.type
DECTRIS EIGER2 XE 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9795
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
Aimless (0.7.3)
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.10.4 (17-FEB-2023))
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
71.841 128.508 198.377 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97950 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
49.590 49.590 2.560
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.500 11.460 2.500
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.236 0.079 3.303
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.246 0.083 3.437
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.067 0.025 0.947
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
851075 8201 58886
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
64474 778 4509
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
6.70 17.90 0.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 98.9 99.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.2 10.5 13.1
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.993 0.983 0.457

Refinement
PDB entry ID
_entry.id
8OIZ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-03-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.6 - 2.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2133 / 0.2615
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given