Experiment | |
---|---|
Method _exptl.method | ELECTRON CRYSTALLOGRAPHY The method used in the experiment. |
Source type _diffrn_source.source | ELECTRON MICROSCOPE The general class of the radiation source. |
Source details _diffrn_source.type | FEI TALOS ARCTICA The make, model or name of the source of radiation. |
Detector technology _diffrn_detector.detector | CMOS DETECTOR The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2019-03-21 The date of data collection. |
Detector _diffrn_detector.type | FEI CETA (4k x 4k) The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 0.0251 Comma separated list of wavelengths or wavelength range. |
Software | |
Data reduction _software.classification | XDS (Wolfgang Kabsch; Wolfgang.Kabsch@mpimf-heidelberg.mpg.de) The classification of the program according to its |
Data scaling _software.classification | XSCALE (Wolfgang Kabsch) The classification of the program according to its |
Phasing _software.classification | SHELXD The classification of the program according to its |
Refinement _software.classification | PHENIX (dev_3360; Paul D. Adams; PDAdams@lbl.gov) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 1 21 1 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 33.17 Unit-cell length a corresponding to the structure reported in 4.78 Unit-cell length b corresponding to the structure reported in 30.33 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 111.1 Unit-cell angle beta of the reported structure in degrees. 90.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 0.02510 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
---|---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 7.737 The largest value in angstroms for the interplanar spacings | 7.737 The highest value in angstroms for the interplanar spacings | 1.130 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 1.100 The smallest value in angstroms for the interplanar spacings | 4.920 The smallest value in angstroms for the interplanar spacings | 1.100 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.189 The R value for merging intensities satisfying the observed | 0.133 The value of Rmerge(I) for reflections classified as 'observed' | 0.459 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all | 0.204 The redundancy-independent merging R factor value Rrim, | 0.155 The redundancy-independent merging R factor value Rrim, | 0.498 The redundancy-independent merging R factor value Rrim, |
Rpim | - | - | - |
Total number of observations _reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs | 23638 Total number of measured reflections. | 88 The number of reflections classified as 'observed' | 1566 The number of reflections classified as 'observed' |
Total number unique _reflns.number_obs _reflns_shell.number_unique_obs | 3546 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 26 The total number of measured reflections classified as 'observed' | 255 The total number of measured reflections classified as 'observed' |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 5.41 The mean of the ratio of the intensities to their | 6.87 The ratio of the mean of the intensities of the reflections | 3.28 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 85.2 The percentage of geometrically possible reflections represented | 42.6 The percentage of geometrically possible reflections represented | 81.7 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 6.7 Overall redundancy for this data set. | 3.4 Redundancy for the current shell. | 6.1 Redundancy for the current shell. |
CC(1/2) _reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half | 0.987 The Pearson's correlation coefficient expressed as a decimal value | 0.982 The Pearson's correlation coefficient expressed as a decimal value | 0.828 The Pearson's correlation coefficient expressed as a decimal value |
Refinement | |
---|---|
PDB entry ID _entry.id | 6OIZ |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2019-04-10 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 7.7 - 1.100 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1944 / 0.2126 |
Structure solution method _refine.pdbx_method_to_determine_struct | AB INITIO PHASING |