Data quality metrics extracted from 4ogm.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4OGM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL7-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL7-1
Temperature [K]
_diffrn.ambient_temp
298.0
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-12-04
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1
Software
Data scaling #1
_software.classification
Aimless (0.1.26; 03/07/12; Phil Evans)
Data scaling #2
_software.classification
XDS
Data scaling #3
_software.classification
XSCALE
Phasing
_software.classification
PHASER (2.5.5; Sun Sep 29 10:11:14 2013; Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
PHENIX (1.8.4_1496; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
66.224 74.710 97.517 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.10000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
39.264 39.260 2.310
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.230 8.930 2.230
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.212 0.013 0.013
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 5347 20946
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
23856 444 1884
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.50 59.70 1.90
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.8 98.9 87.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
14.1 12.0 11.1
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4OGM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-01-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.3 - 2.234 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1860 / 0.2464
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given