Data quality metrics extracted from 1od4.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1OD4 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X4A
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X4A
Temperature [K]
_diffrn.ambient_temp
100.0
Collection date
_diffrn_detector.pdbx_collection_date
2002-05-02
Software
Phasing #1
_software.classification
SnB
Phasing #2
_software.classification
SOLVE
Refinement
_software.classification
CNS (1.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
246.91 123.91 145.07 90.00 94.11 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 2.800
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.700 2.700
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.076 0.181
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
120309 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
16.00 7.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.0 93.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.0 4.0
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
1OD4
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2003-02-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
30.0 - 2.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2260 / 0.2620
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD