Data quality metrics extracted from 5ocd.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5OCD at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SOLEIL BEAMLINE PROXIMA 1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SOLEIL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PROXIMA 1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-09-16
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.978570
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.10.3)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
185.031 97.800 211.282 90.00 115.58 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97857 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
190.600
High resolution limit [Å]
_reflns.d_resolution_high
3.058
Rmerge
_reflns.pdbx_Rsym_value
0.065
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
64644
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
12.65
Completeness [%]
_reflns.percent_possible_obs
99.0
Multiplicity
_reflns.pdbx_redundancy
3.7
CC(1/2)
_reflns.pdbx_CC_half
0.998

Refinement
PDB entry ID
_entry.id
5OCD
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-06-30
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.2 - 3.060 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2100 / 0.2490
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5MLQ