Data quality metrics extracted from 6obc.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6OBC at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-09-25
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.977
Software
Data reduction
_software.classification
HKL-2000 (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling
_software.classification
HKL-2000 (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing
_software.classification
PHASER (2.5.6; Mon Feb 10 17:06:44 2014; Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
PHENIX (1.7.1_743); Paul D. Adams; PDAdams@lbl.gov
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
38.748 47.197 58.430 100.25 97.30 109.71
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97700 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.790
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.760 4.780 1.760
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.068 0.024 0.646
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.096 0.035 0.914
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.068 0.024 0.646
Total number of observations
_reflns.pdbx_number_measured_all
70534 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
35851 1847 1717
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.00 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.8 99.7 96.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.0 2.0 2.0
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.997 0.647

Refinement
PDB entry ID
_entry.id
6OBC
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-03-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.2 - 1.762 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1851 / 0.2274
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given