Data quality metrics extracted from 3o39.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3O39 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
CLSI BEAMLINE 08ID-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
CLSI
Beamline
_diffrn_source.pdbx_synchrotron_beamline
08ID-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-07-10
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97923
Software
Data reduction
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing #1
_software.classification
SHARP (Eric de La Fortelle; sharp-develop@globalphasing.com)
Phasing #2
_software.classification
RESOLVE (Thomas C. Terwilliger; terwilliger@lanl.gov)
Refinement #1
_software.classification
PHENIX (1.6_289)
Refinement #2
_software.classification
REFMAC (5.2.0019; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 62
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
68.971 68.971 124.281 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97923 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
50.000
High resolution limit [Å]
_reflns.d_resolution_high
2.600
Rmerge
_reflns.pdbx_Rsym_value
0.116
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
19671
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
37.07
  Completeness [%] -
Multiplicity
_reflns.pdbx_redundancy
9.3
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
3O39
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-07-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.1 - 2.599 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2431 / 0.2808
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD