Data quality metrics extracted from 5o1k.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5O1K at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE BM16
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BM16
Temperature [K]
_diffrn.ambient_temp
293
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-02-20
Detector
_diffrn_detector.type
ADSC QUANTUM 210r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.980
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA (3.3.22)
Phasing
_software.classification
REFMAC (5.8.0135)
Refinement
_software.classification
REFMAC (5.8.0135)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
89.257 89.257 115.416 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
23.121 23.121 2.160
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.048 6.480 2.050
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.077 0.031 0.758
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.092 0.040 0.882
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.034 0.015 0.323
  Total number of observations - - -
Total number unique
_reflns.number_obs
11323 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.60 16.00 1.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.6 98.0 97.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.4 6.7 7.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5O1K
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-05-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 2.050 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1524 / 0.2022
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1q1f