Data quality metrics extracted from 5o16.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5O16 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-04-08
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.976256
Software
Data reduction
_software.classification
autoPROC
Data scaling
_software.classification
autoPROC
Phasing
_software.classification
BALBES
Refinement #1
_software.classification
PHENIX (1.11.1_2575: ???)
Refinement #2
_software.classification
REFMAC
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
114.548 114.548 132.048 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97626 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
114.548
High resolution limit [Å]
_reflns.d_resolution_high
2.745
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.150
Rmeas
_reflns.pdbx_Rrim_I_all
0.153
Rpim
_reflns.pdbx_Rpim_I_all
0.030
  Total number of observations -
Total number unique
_reflns.number_obs
23640
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
18.90
Completeness [%]
_reflns.percent_possible_obs
100.0
Multiplicity
_reflns.pdbx_redundancy
25.5
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5O16
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-05-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
41.1 - 2.745 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1856 / 0.2383
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4ln9