Data quality metrics extracted from 4nzk.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4NZK at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 8.2.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
8.2.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-10-17
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.918401,0.979346,0.979261
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (3.3.20; Phil Evans; pre@mrc-lmb.cam.ac.uk)
Phasing #1
_software.classification
SHELX (George M. Sheldrick; gsheldr@shelx.uni-ac.gwdg.de)
Phasing #2
_software.classification
SHARP (Eric de La Fortelle; sharp-develop@globalphasing.com)
Phasing #3
_software.classification
SHELXD
Model building
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Refinement
_software.classification
REFMAC (5.7.0032; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
102.125 102.125 123.311 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.918400.979350.97926 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.481 29.481 1.530
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.490 6.660 1.490
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.110 0.015 0.015
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 7605 46602
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
62386 832 4543
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
12.50 9.90 0.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 98.9 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
10.3 9.1 10.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4NZK
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-12-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.5 - 1.490 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1247 / 0.1577
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD