Data quality metrics extracted from 4ny1.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4NY1 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
BRUKER AXS MICROSTAR
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-11-08
Detector
_diffrn_detector.type
Bruker Platinum 135
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5419
Software
Data collection
_software.classification
PROTEUM PLUS (PLUS)
Data reduction
_software.classification
PROTEUM PLUS (PLUS)
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.5.0109; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
150.742 150.742 46.310 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54190 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
75.400 1.920 1.730
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.870 1.700
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.058 0.137 0.335
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
42114 2489 2202
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.29 3.90 1.64
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.6 99.4 94.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
1.9 1.7 1.5
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4NY1
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-12-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.7 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1615 / 0.1938
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given