Data quality metrics extracted from 7nuy.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7NUY at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALBA BEAMLINE XALOC
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALBA
Beamline
_diffrn_source.pdbx_synchrotron_beamline
XALOC
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2020-05-03
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9793
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
Aimless (0.7.4)
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.19_4092)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
38.50 70.96 78.75 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97930 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
78.750 78.750 1.680
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.650 9.040 1.650
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.124 0.044 0.504
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.144 0.051 0.579
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.071 0.024 0.277
Total number of observations
_reflns.pdbx_number_measured_all
95142 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
23985 187 1065
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.40 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
90.2 94.9 81.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.0 4.0 4.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.942 0.995 0.553

Refinement
PDB entry ID
_entry.id
7NUY
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-03-15
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
52.7 - 1.650 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1723 / 0.2205
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
7NUZ