Data quality metrics extracted from 3nu1.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3NU1 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06SA
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2009-05-12
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9788, 0.9184, 0.9796, 0.9794
Software
Data collection
_software.classification
ADSC (Quantum)
Data processing
_software.classification
XSCALE (Wolfgang Kabsch)
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
CNS
Refinement
_software.classification
PHENIX (1.6.1_357; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
89.24 89.24 288.90 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.978800.918400.979600.97940 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 2.360
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.300 10.280 2.300
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.060 0.036 1.548
Rmeas
_reflns_shell.pdbx_Rrim_I_all
- 0.037 1.567
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 13766 85237
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
31308 421 2203
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
38.49 90.20 3.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 94.2 96.9
  Multiplicity - - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3NU1
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-07-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.6 - 2.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1956 / 0.2382
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD