Data quality metrics extracted from 6ntw.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6NTW at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-03-25
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9774
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.6.2)
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10.1_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
126.499 126.499 88.801 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97740 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
89.448 47.590 1.780
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.750 9.090 1.750
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.415 - 0.043
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.437 - 0.045
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.132 - 0.014
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
619864 6310 1887
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
18943 615 1320
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
3.20 - 46.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
90.4 99.5 33.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
9.4 10.3 1.4
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.995 - 0.999

Refinement
PDB entry ID
_entry.id
6NTW
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-01-30
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
89.4 - 2.760 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2561 / 0.2981
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given