Data quality metrics extracted from 5nrm.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5NRM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID29
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID29
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-12-13
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9763
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
Aimless (0.3.11)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0073)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
30.49 59.95 51.26 90.00 106.88 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97630 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
18.980 18.980 1.420
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.400 7.670 1.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.074 0.040 0.438
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.095 0.050 0.566
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.059 0.031 0.356
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
76946 508 3686
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
33539 203 1633
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
6.50 18.70 1.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.6 92.3 95.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.3 2.5 2.3
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.995 0.995 0.503

Refinement
PDB entry ID
_entry.id
5NRM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-04-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.0 - 1.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1783 / 0.2052