Data quality metrics extracted from 2nnv.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2NNV at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-11-10
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1
Software
Data collection
_software.classification
Blu-Ice
Data reduction #1
_software.classification
HKL-2000
Data reduction #2
_software.classification
DENZO (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data scaling #1
_software.classification
SCALEPACK (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data scaling #2
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
SHELXL-97
Refinement #2
_software.classification
CNS (Axel T. Brunger; axel.brunger@yale.edu)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
42.365 41.213 72.145 90.00 104.83 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.10000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
80.000 1.140
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.100 1.100
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.072 0.348
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
90979 8549
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
12.80 2.20
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
92.7 87.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.4 2.0
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2NNV
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2006-10-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
80.0 - 1.100 Å
R
_refine.ls_R_factor_obs
0.1320
WARNING: no Rwork given
Rfree
_refine.ls_R_factor_R_free
0.1640
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2CBA