Data quality metrics extracted from 5nm4.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5NM4 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
FREE ELECTRON LASER
Source details
_diffrn_source.type
SLAC LCLS BEAMLINE CXI
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLAC LCLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
CXI
Temperature [K]
_diffrn.ambient_temp
293
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-07-14
Detector
_diffrn_detector.type
CS-PAD CXI-2
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.3
Software
Data reduction
_software.classification
CrystFEL
Data scaling
_software.classification
CrystFEL
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.10.1_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
39.89 179.15 141.20 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.30000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.200 1.760
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.700
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
56793 3138
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
2.93 0.44
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
93.7 53.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
23.3 3.0
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.970 0.110

Refinement
PDB entry ID
_entry.id
5NM4
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-04-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.6 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2123 / 0.2354
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD