Data quality metrics extracted from 1nfd.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1NFD at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X12C
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X12C
Temperature [K]
_diffrn.ambient_temp
110
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
1996-01-26
Detector
_diffrn_detector.type
MARRESEARCH
Software
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK
Phasing #1
_software.classification
AMoRE
Phasing #2
_software.classification
X-PLOR
Model building
_software.classification
X-PLOR
Refinement
_software.classification
X-PLOR
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
74.74 122.30 115.84 90.00 107.95 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.08600 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
15.000
High resolution limit [Å]
_reflns.d_resolution_high
2.800
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.078
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
37321
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
12.10
Completeness [%]
_reflns.percent_possible_obs
76.6
Multiplicity
_reflns.pdbx_redundancy
3.1
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
1NFD
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
1997-08-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
15.0 - 2.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2430 / 0.3090
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT AND MAD PHASING
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1TCR FOR TCR AND A PARTIALLY REFINED FAB FROM SACCHETTINI GROUP