Data quality metrics extracted from 5nez.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5NEZ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06DA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06DA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-07-16
Detector
_diffrn_detector.type
DECTRIS PILATUS 300K
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data reduction
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10pre_2119: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
76.978 136.409 152.503 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
48.409
High resolution limit [Å]
_reflns.d_resolution_high
2.394
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.079
Rmeas
_reflns.pdbx_Rrim_I_all
0.082
Rpim
_reflns.pdbx_Rpim_I_all
0.022
  Total number of observations -
Total number unique
_reflns.number_obs
63701
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
26.06
Completeness [%]
_reflns.percent_possible_obs
99.5
Multiplicity
_reflns.pdbx_redundancy
13.6
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5NEZ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-03-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.4 - 2.394 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1759 / 0.2303
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given