Data quality metrics extracted from 3nd0.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3ND0 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X29A
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X29A
Temperature [K]
_diffrn.ambient_temp
78
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2008-03-23
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0809
Software
Data scaling
_software.classification
SCALA (3.3.16; 2010/01/06; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Phasing
_software.classification
PHASER (2.1.4; Fri Nov 13 13:37:48 2009; Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement #1
_software.classification
PHENIX (1.6.1_357)
Refinement #2
_software.classification
REFMAC (5.5.0109; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 3 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
203.79 203.79 96.82 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.08090 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
67.000
High resolution limit [Å]
_reflns.d_resolution_high
3.200
Rmerge
_reflns.pdbx_Rsym_value
0.258
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
35234
  <I/σ(I)> -
Completeness [%]
_reflns.percent_possible_obs
92.0
Multiplicity
_reflns.pdbx_redundancy
15.1
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
3ND0
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-06-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
65.2 - 3.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2426 / 0.2688
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given