Data quality metrics extracted from 5n86.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5N86 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-10-06
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9184
Software
Data processing
_software.classification
MOSFLM
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (3.3.21)
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.11.1_2575)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
48.74 55.83 87.52 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91840 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.069 48.740 1.560
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.484 4.690 1.484
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.085 0.068 0.183
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.094 0.075 0.201
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.038 0.031 0.082
  Total number of observations - - -
Total number unique
_reflns.number_obs
40147 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.90 7.90 3.20
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 99.7 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.7 5.4 5.9
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5N86
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-02-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.1 - 1.484 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1451 / 0.1717
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1O70