Data quality metrics extracted from 5n75.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5N75 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-003
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-10-25
Detector
_diffrn_detector.type
DECTRIS PILATUS 200K
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.5.31)
Phasing
_software.classification
BUSTER
Refinement
_software.classification
PHENIX (1.11.1_2575)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
82.176 112.269 62.820 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
45.600 45.600 1.840
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.800 9.010 1.800
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.039 0.017 0.120
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.043 0.019 0.136
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.017 0.008 0.063
  Total number of observations - - -
Total number unique
_reflns.number_obs
27105 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
33.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.6 98.3 94.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.2 4.5 4.3
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 1.000 0.989

Refinement
PDB entry ID
_entry.id
5N75
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-02-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.4 - 1.803 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1530 / 0.1859
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3MHR