Data quality metrics extracted from 6n6j.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6N6J at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
CHESS BEAMLINE F1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
CHESS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
F1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-03-22
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.977
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA (3.3.22)
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.14_3260)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
45.863 87.566 124.225 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97700 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
45.863 45.863 1.390
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.317 4.160 1.320
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.063 0.034 0.634
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.068 0.037 0.718
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.025 0.013 0.329
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
118674 4074 16727
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
16.40 15.70 1.20
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.6 99.8 97.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.3 7.6 4.5
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
6N6J
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-11-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
31.7 - 1.317 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1528 / 0.1701
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6N6I