Data quality metrics extracted from 3n5j.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3N5J at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06SA
Temperature [K]
_diffrn.ambient_temp
105
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2004-09-02
Detector
_diffrn_detector.type
MAR CCD 165 mm
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97936
Software
Data reduction
_software.classification
XDS
Data scaling #1
_software.classification
XDS
Data scaling #2
_software.classification
XSCALE
Phasing
_software.classification
APRV
Model building
_software.classification
APRV
Refinement
_software.classification
CNX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
111.112 111.112 78.245 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97936 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 2.410
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.350 2.350
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.050 0.191
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
20763 1490
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
23.70 9.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.0 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.2 7.1
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3N5J
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-05-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
42.0 - 2.350 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2090 / 0.2400
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS