Data quality metrics extracted from 6n3y.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6N3Y at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 17-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
17-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-07-15
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.000
Software
Data scaling
_software.classification
autoPROC
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.13_2998)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
78.161 46.327 63.896 90.00 94.32 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
63.714 63.714 1.583
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.578 7.320 1.578
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.059 0.030 0.248
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.072 0.037 0.331
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.040 0.021 0.217
Total number of observations
_reflns.pdbx_number_measured_all
82943 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
27713 340 146
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
87.8 98.0 44.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.0 3.0 1.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.995 0.998 0.850

Refinement
PDB entry ID
_entry.id
6N3Y
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-11-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.4 - 1.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2048 / 0.2475
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3TW2