Data quality metrics extracted from 3mz2.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3MZ2 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL11-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL11-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-12-03
Detector
_diffrn_detector.type
MARMOSAIC 325 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.91837,0.97925,0.97895
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (3.3.15; 2009/03/31; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Phasing #1
_software.classification
PHENIX
Phasing #2
_software.classification
SOLVE
Model building
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Refinement #1
_software.classification
REFMAC (5.5.0102; Garib N. Murshudov; garib@ysbl.york.ac.uk)
Refinement #2
_software.classification
PHENIX (P.D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
53.577 90.481 60.373 90.00 111.95 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.918370.979250.97895 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.615 47.620 1.630
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.550 4.900 1.550
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.080 0.037 0.610
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 9436 41991
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
77355 2516 11285
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.70 20.40 2.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.8 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.8 3.8 3.7
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3MZ2
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-05-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.6 - 1.550 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1660 / 0.1970
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD