Data quality metrics extracted from 5mxw.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5MXW at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
MAX II BEAMLINE I911-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
MAX II
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I911-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-12-15
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0000000
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 65
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
74.40 74.40 67.31 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.590 46.590 1.660
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.570 4.690 1.570
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.037 0.022 0.744
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.041 0.025 0.834
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
147160 5282 22935
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
29524 1132 4688
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
22.20 63.86 2.01
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 99.0 98.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.0 4.7 4.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.789

Refinement
PDB entry ID
_entry.id
5MXW
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-01-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.6 - 1.570 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1850 / 0.2059
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2qim