Data quality metrics extracted from 7ms2.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7MS2 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I24
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I24
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-09-10
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.96863
Software
Data reduction
_software.classification
xia2
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER (2.7.17)
Refinement
_software.classification
PHENIX (1.19.2-4158)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
63.84 148.06 198.64 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96863 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
69.370 69.370 2.150
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.040 6.450 2.040
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.321 0.057 9.990
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.327 0.058 15.003
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.063 0.012 2.873
Total number of observations
_reflns.pdbx_number_measured_all
3197927 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
120455 4153 17359
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.80 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 99.9 99.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
26.5 23.5 26.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.596

Refinement
PDB entry ID
_entry.id
7MS2
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-05-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
60.4 - 2.040 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2017 / 0.2297
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2X40