Data quality metrics extracted from 5mf7.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5MF7 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-03-03
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.87260
Software
Data collection
_software.classification
HKL-2000
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER (2.7.3)
Refinement
_software.classification
PHENIX (dev-2499_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
138.056 50.034 67.202 90.00 92.52 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.87260 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.510
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.480 4.020 1.480
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.102 0.047 1.533
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
75213 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
5.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.0 99.6 93.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.0 7.8 6.5
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.999 0.714

Refinement
PDB entry ID
_entry.id
5MF7
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-11-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.2 - 1.590 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1984 / 0.2332
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDBID 2AC0