Data quality metrics extracted from 3me9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3ME9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU FR-E SUPERBRIGHT
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2009-10-05
Detector
_diffrn_detector.type
RIGAKU RAXIS
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction #1
_software.classification
DENZO (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data reduction #2
_software.classification
HKL-3000
Data scaling #1
_software.classification
SCALEPACK (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data scaling #2
_software.classification
HKL-3000
Phasing
_software.classification
SHELX (George Sheldrick; gsheldr@shelx.uni-ac.gwdg.de)
Refinement
_software.classification
REFMAC (5.5.0102; Murshudov, G.N.; ccp4@dl.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
50.038 65.434 105.619 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979271.54180 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.000 20.000 1.390
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.370 3.710 1.370
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.080 0.041 0.972
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
73960 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.70 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.9 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.1 6.9 6.9
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3ME9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-03-31
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 1.370 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1910 / 0.2135
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD