Data quality metrics extracted from 5mcw.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5MCW at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID29
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID29
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-07-20
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.88560
Software
Data collection
_software.classification
HKL-2000
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER (2.5.7)
Refinement
_software.classification
PHENIX (dev-2276_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
111.403 68.408 69.680 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.88560 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.930
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.897 5.160 1.897
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.143 0.098 0.305
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
40479 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
3.40 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.5 99.3 75.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.1 6.0 5.2
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.990 0.954

Refinement
PDB entry ID
_entry.id
5MCW
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-11-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.8 - 1.897 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1997 / 0.2348
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1TSR