Data quality metrics extracted from 6m9j.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6M9J at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
ELECTRON CRYSTALLOGRAPHY
Collection date
_diffrn_detector.pdbx_collection_date
2017-11-27
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Phasing
_software.classification
SHELXD
Refinement
_software.classification
PHENIX (1.12_2829; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21/c 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
14.03 9.22 20.77 90.00 104.48 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
NA

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
7.629 7.629 0.920
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
0.900 4.030 0.900
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.128 0.065 0.332
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.151 0.079 0.387
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
9884 82 728
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
2906 29 230
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
5.46 10.13 2.52
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
77.6 69.0 79.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.4 2.8 3.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.991 0.994 0.962

Refinement
PDB entry ID
_entry.id
6M9J
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-08-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
7.6 - 0.900 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2325 / 0.2518