Experiment | |
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Method _exptl.method | ELECTRON CRYSTALLOGRAPHY The method used in the experiment. |
Collection date _diffrn_detector.pdbx_collection_date | 2017-09-24 The date of data collection. |
Software | |
Data reduction _software.classification | XDS The classification of the program according to its |
Data scaling _software.classification | XSCALE (Wolfgang Kabsch) The classification of the program according to its |
Phasing _software.classification | SHELXD The classification of the program according to its |
Refinement _software.classification | PHENIX (1.12_2829; Paul D. Adams; PDAdams@lbl.gov) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 21 21 21 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 9.19 Unit-cell length a corresponding to the structure reported in 11.89 Unit-cell length b corresponding to the structure reported in 22.43 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 90.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | NA |
Data quality metrics | Overall | InnerShell | OuterShell |
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Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 7.271 The largest value in angstroms for the interplanar spacings | 7.271 The highest value in angstroms for the interplanar spacings | 1.000 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 0.900 The smallest value in angstroms for the interplanar spacings | 5.000 The smallest value in angstroms for the interplanar spacings | 0.900 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.162 The R value for merging intensities satisfying the observed | 0.106 The value of Rmerge(I) for reflections classified as 'observed' | 0.357 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all | 0.185 The redundancy-independent merging R factor value Rrim, | 0.126 The redundancy-independent merging R factor value Rrim, | 0.409 The redundancy-independent merging R factor value Rrim, |
Rpim | - | - | - |
Total number of observations _reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs | 7513 Total number of measured reflections. | 28 The number of reflections classified as 'observed' | 1901 The number of reflections classified as 'observed' |
Total number unique _reflns.number_obs _reflns_shell.number_unique_obs | 1760 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 9 The total number of measured reflections classified as 'observed' | 452 The total number of measured reflections classified as 'observed' |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 5.50 The mean of the ratio of the intensities to their | 9.03 The ratio of the mean of the intensities of the reflections | 3.09 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 85.5 The percentage of geometrically possible reflections represented | 45.0 The percentage of geometrically possible reflections represented | 83.7 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 4.3 Overall redundancy for this data set. | 3.1 Redundancy for the current shell. | 4.2 Redundancy for the current shell. |
CC(1/2) _reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half | 0.990 The Pearson's correlation coefficient expressed as a decimal value | 0.997 The Pearson's correlation coefficient expressed as a decimal value | 0.726 The Pearson's correlation coefficient expressed as a decimal value |
Refinement | |
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PDB entry ID _entry.id | 6M9I |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2018-08-23 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 0.9 - 0.900 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.2173 / 0.2324 |