Data quality metrics extracted from 3m8v.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3M8V at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2008-11-12
Detector
_diffrn_detector.type
MAR scanner 345 mm plate
Software
Data collection
_software.classification
MAR345dtb
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
MOLREP
Refinement #1
_software.classification
PHENIX (1.6.3_473)
Refinement #2
_software.classification
REFMAC (5.2.0019)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 63 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
114.797 114.797 62.228 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54100 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 2.800
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.700 2.700
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.pdbx_Rsym_value
0.069 0.424
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
7037 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
35.01 5.86
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 99.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
9.9 9.9
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3M8V
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-03-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
28.7 - 2.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2005 / 0.2442
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 3M4T