Data quality metrics extracted from 5m7p.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5M7P at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE MASSIF-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MASSIF-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-09-01
Detector
_diffrn_detector.type
DECTRIS PILATUS3 2M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9660
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA
Phasing
_software.classification
MOLREP
Refinement
_software.classification
BUSTER (2.10.2)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
116.979 190.840 111.883 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96600 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.870 2.490
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.360 2.360
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.069 0.746
Rmeas
_reflns.pdbx_Rrim_I_all
0.077 -
Rpim
_reflns.pdbx_Rpim_I_all
0.034 -
  Total number of observations - -
Total number unique
_reflns.number_obs
51562 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.70 2.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 98.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.8 4.8
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.712

Refinement
PDB entry ID
_entry.id
5M7P
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-10-28
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.9 - 2.360 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1990 / 0.2290