Data quality metrics extracted from 7m5f.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7M5F at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-08-14
Detector
_diffrn_detector.type
DECTRIS PILATUS3 X 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
HKL-3000
Refinement
_software.classification
PHENIX (dev_3409)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
60.691 97.241 44.495 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 1.620
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.590 1.590
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.132 0.650
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
35744 1750
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
20.82 2.98
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.0 99.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.6 4.2
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.775

Refinement
PDB entry ID
_entry.id
7M5F
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-03-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.6 - 1.590 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1404 / 0.1667
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD