Data quality metrics extracted from 4m5t.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4M5T at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-C
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-C
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2012-10-26
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9791
Software
Data collection
_software.classification
ADSC (Quantum)
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
PHENIX (1.8.1_1168)
Refinement #2
_software.classification
BUSTER-TNT (BUSTER 2.10.0; Gerard Bricogne; buster-develop@GlobalPhasing.com)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
117.01 46.77 77.71 90.00 117.71 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97910 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
68.799 68.799 2.050
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.000 8.940 2.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.059 0.023 0.365
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
24867 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.10 33.71 3.48
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.5 98.4 97.2
  Multiplicity - - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4M5T
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-08-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
68.8 - 2.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1927 / 0.2440
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given