Data quality metrics extracted from 9m4s.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9M4S at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL18U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL18U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-01-17
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.13_2998: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
50.699 50.699 55.239 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97920 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.660
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.600 3.450 1.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.093 0.065 0.339
Rmeas
_reflns_shell.pdbx_Rrim_I_all
- 0.069 0.361
Rpim
_reflns_shell.pdbx_Rpim_I_all
- 0.024 0.123
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
10759 1099 1055
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 99.1 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.4 8.3 8.6
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.946 0.996 0.946

Refinement
PDB entry ID
_entry.id
9M4S
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2025-03-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.9 - 1.601 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1851 / 0.2246
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given