Data quality metrics extracted from 5m33.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5M33 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2012-11-23
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.972499
Software
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
31.445 75.846 37.363 90.00 107.12 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97250 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
26.000 1.300
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.280 1.280
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.062 0.380
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
38224 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
21.60 3.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
88.6 40.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.2 3.8
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.934

Refinement
PDB entry ID
_entry.id
5M33
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-10-14
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
26.0 - 1.280 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1363 / 0.1729
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1G8Q