Data quality metrics extracted from 5m2s.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5M2S at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-10-02
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.98402
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
Aimless (0.3.11)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0073)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
45.61 64.49 47.67 90.00 116.72 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98402 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
42.580 32.240 1.730
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 9.000 1.700
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.115 0.063 0.287
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
26498 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.5 94.9 84.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.2 4.4 3.0
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.991 0.988 0.834

Refinement
PDB entry ID
_entry.id
5M2S
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-10-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
42.6 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1340 / 0.1566
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5M2O