Data quality metrics extracted from 4m11.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4M11 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-C
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-C
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-11-19
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data collection
_software.classification
HKL-2000
Data scaling #1
_software.classification
SCALA (3.3.20; 2011/05/18; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Data scaling #2
_software.classification
XSCALE
Phasing
_software.classification
PHASES
Refinement
_software.classification
PHENIX (1.8.2_1309; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 2 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
121.627 133.538 180.232 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97920 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
49.954 49.954 2.580
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.450 7.740 2.450
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.133 0.044 0.654
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 21384 87103
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
106951 3559 15407
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.20 11.00 1.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.9 96.4 98.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.1 6.0 5.7
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4M11
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-08-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
50.0 - 2.450 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2018 / 0.2306
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB entry 3NT1, chain Å