Data quality metrics extracted from 3lf5.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3LF5 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 17-BM
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
17-BM
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-11-21
Detector
_diffrn_detector.type
ADSC QUANTUM 210r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0000
Software
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Phasing
_software.classification
MOLREP (Alexei Vaguine; alexei@ysbl.york.ac.uk)
Refinement
_software.classification
REFMAC (refmac_5.5.0109; 24/04/2001; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
38.48 56.37 42.56 90.00 100.67 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 1.280
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.250 5.590 1.250
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.058 0.028 0.724
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 1663 10734
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
48981 509 3431
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.02 33.40 1.90
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.0 87.5 93.6
  Multiplicity - - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3LF5
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-01-15
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
18.9 - 1.250 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1468 / 0.1726
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1EUE