Data quality metrics extracted from 5lcc.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5LCC at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALBA BEAMLINE XALOC
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALBA
Beamline
_diffrn_source.pdbx_synchrotron_beamline
XALOC
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-02-03
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0135)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
53.716 63.245 120.365 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97930 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
15.000
High resolution limit [Å]
_reflns.d_resolution_high
2.000
Rmerge
_reflns.pdbx_Rsym_value
0.045
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
25874
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
18.70
Completeness [%]
_reflns.percent_possible_obs
90.8
Multiplicity
_reflns.pdbx_redundancy
5.1
CC(1/2)
_reflns.pdbx_CC_half
0.999

Refinement
PDB entry ID
_entry.id
5LCC
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-06-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
15.0 - 2.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1850 / 0.2313
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1spv